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PythonSynthesis module

PythonScript

Bases: Trainable

The python code to transform a JSON object into another JSON object.

The script is executed inside the active sandbox (by default a MirageSandbox — a real Python 3 interpreter). Scripts must observe the following constraints:

  • The input JSON object is exposed as a dict named inputs; the script must assign the output JSON object to a variable named result before it ends.
  • The full standard library is importable, along with any third-party packages installed in the environment, and class / match statements are supported — write ordinary Python.
  • Tools bound to the module are exposed as global functions under their tool name: call them directly. Every tool call returns a dict: a tool wrapping def f(x) -> int yields {"result": <value>}, a tool that already returns a dict yields that dict directly. For example, with a bound tool web_search:

hits = web_search(query=inputs.get("q"))
# hits is a dict — index the field you need
result = {"answer": hits["results"][0]["title"]}
- Execution is bounded by the module's timeout; long-running scripts are aborted. The exact language and stdlib constraints ultimately depend on the active sandbox (consult sandbox.description).

Source code in synalinks/src/modules/synthesis/python_synthesis.py
class PythonScript(Trainable):
    """The python code to transform a JSON object into another JSON object.

    The script is executed inside the active sandbox (by default a
    ``MirageSandbox`` — a real Python 3 interpreter). Scripts must observe the
    following constraints:

    - The input JSON object is exposed as a dict named ``inputs``; the script
      must assign the output JSON object to a variable named ``result`` before
      it ends.
    - The full standard library is importable, along with any third-party
      packages installed in the environment, and ``class`` / ``match``
      statements are supported — write ordinary Python.
    - Tools bound to the module are exposed as **global functions** under
      their tool name: call them directly. Every tool call returns a
      **dict**: a tool wrapping ``def f(x) -> int`` yields
      ``{"result": <value>}``, a tool that already returns a dict yields
      that dict directly. For example, with a bound tool ``web_search``:

      ```python
      hits = web_search(query=inputs.get("q"))
      # hits is a dict — index the field you need
      result = {"answer": hits["results"][0]["title"]}
      ```
    - Execution is bounded by the module's ``timeout``; long-running scripts
      are aborted. The exact language and stdlib constraints ultimately depend
      on the active sandbox (consult ``sandbox.description``).
    """

    python_script: str = Field(
        description=(
            "A Python script that transforms a JSON input into a JSON "
            "output. The script reads the input from a dict named "
            "`inputs` and must assign the output dict to a variable "
            "named `result` before it ends. Exact language and stdlib "
            "constraints depend on the active sandbox."
        ),
    )

PythonSynthesis

Bases: Module

A code Python code transformation on JSON data.

The script runs inside the active sandbox (by default a MirageSandbox, a real Python 3 interpreter): the full standard library and any installed third-party packages are available, and class / match statements are supported. The exact constraints depend on the active sandbox.

This module features a python code as trainable variable, allowing the optimizers to refine the code during the training loop based on iterative feedback and automatic selection of the best script.

This module works ONLY with advanced optimizers (NOT the RandomFewShot optimizer).

The module executes the entire Python script and expects the result to be stored in a variable named 'result' at the end of execution.

Example:

import synalinks
import asyncio

default_python_script = \
"""
def transform(inputs):
    # TODO implement the code to transform the input grid into the output grid
    return {"output_grid": inputs.get("input_grid")}

result = transform(inputs)
"""

async def main():
    inputs = synalinks.Input(
        data_model=synalinks.datasets.arcagi.get_input_data_model(),
    )
    outputs = await synalinks.PythonSynthesis(
        data_model=synalinks.datasets.arcagi.get_output_data_model()
        python_script=default_python_script,
        default_return_value={"output_grid": [[]]},
    )(inputs)

    program = synalinks.Program(
        inputs=inputs,
        outputs=outputs,
        name="python_script_synthesis",
        description="A program to solve ARCAGI with python code",
    )

Parameters:

Name Type Description Default
schema dict

The target JSON schema. If not provided use the data_model to infer it.

None
data_model DataModel | SymbolicDataModel | JsonDataModel

The target data model for structured output.

None
python_script str

The default Python script.

None
seed_scripts list

Optional. A list of Python scripts to use as seed for the evolution. If not provided, create a seed from the default configuration.

None
default_return_value dict

Default return value.

None
return_python_script bool

Wether or not to return the python script for evaluation. (Default to False).

False
timeout int

Maximum execution time in seconds. (Default 5 seconds).

5
tools list

Optional. A list of Tool (or MCP tools) exposed to the script as global functions — scripts call them directly (see the PythonScript docs). Passing None or an empty list means no tools are bound.

Naming gotcha: each tool is registered inside the sandbox under tool.name, which is tool._func.__name__. So Tool(_my_helper) registers as _my_helper (underscore preserved) and the script must call _my_helper(...). Name your tool functions exactly as you want them to appear inside the generated script — rename the function, don't rely on an alias.

None
sandbox Sandbox

Optional. A pre-built Sandbox instance to reuse across calls. When supplied, the module will not build its own sandbox at call() time and sandbox_type is derived from type(sandbox). Pass this when the caller owns the sandbox lifecycle and state (variables, imports, function defs) must persist across successive calls — useful at training time when candidate scripts share cached state. When omitted, a fresh sandbox of sandbox_type is built per call.

None
sandbox_type type

Optional. The Sandbox subclass used to build a fresh sandbox per call when no sandbox is injected. Defaults to MirageSandbox, or to type(sandbox) when sandbox is given. Any Sandbox subclass whose __init__ accepts (timeout=..., name=...) works; register custom subclasses with @register_synalinks_serializable so they round-trip through get_config / from_config.

None
name str

Optional. The name of the module.

None
description str

Optional. The description of the module.

None
trainable bool

Whether the module's variables should be trainable.

True

call also accepts an optional sandbox kwarg. The resolution order is: per-call kwarg > constructor-supplied sandbox > a fresh sandbox of sandbox_type. The first two cases let the caller keep sandbox state alive across calls; the third is the stateless-per-call default.

Source code in synalinks/src/modules/synthesis/python_synthesis.py
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@synalinks_export(
    [
        "synalinks.modules.PythonSynthesis",
        "synalinks.PythonSynthesis",
    ]
)
class PythonSynthesis(Module):
    """A code Python code transformation on JSON data.

    The script runs inside the active sandbox (by default a ``MirageSandbox``,
    a real Python 3 interpreter): the full standard library and any installed
    third-party packages are available, and ``class`` / ``match`` statements
    are supported. The exact constraints depend on the active sandbox.

    This module features a python code as trainable variable, allowing the optimizers
    to refine the code during the training loop based on iterative feedback and
    automatic selection of the best script.

    This module works **ONLY** with advanced optimizers (**NOT** the
    `RandomFewShot` optimizer).

    The module executes the entire Python script and expects the result to be stored
    in a variable named 'result' at the end of execution.

    Example:

    ```python
    import synalinks
    import asyncio

    default_python_script = \\
    \"\"\"
    def transform(inputs):
        # TODO implement the code to transform the input grid into the output grid
        return {"output_grid": inputs.get("input_grid")}

    result = transform(inputs)
    \"\"\"

    async def main():
        inputs = synalinks.Input(
            data_model=synalinks.datasets.arcagi.get_input_data_model(),
        )
        outputs = await synalinks.PythonSynthesis(
            data_model=synalinks.datasets.arcagi.get_output_data_model()
            python_script=default_python_script,
            default_return_value={"output_grid": [[]]},
        )(inputs)

        program = synalinks.Program(
            inputs=inputs,
            outputs=outputs,
            name="python_script_synthesis",
            description="A program to solve ARCAGI with python code",
        )
    ```

    Args:
        schema (dict): The target JSON schema.
            If not provided use the `data_model` to infer it.
        data_model (DataModel | SymbolicDataModel | JsonDataModel): The target data
            model for structured output.
        python_script (str): The default Python script.
        seed_scripts (list): Optional. A list of Python scripts to use as seed
            for the evolution. If not provided, create a seed from the default
            configuration.
        default_return_value (dict): Default return value.
        return_python_script (bool): Wether or not to return the python script for
            evaluation. (Default to False).
        timeout (int): Maximum execution time in seconds. (Default 5 seconds).
        tools (list): Optional. A list of `Tool` (or MCP tools) exposed to the
            script as global functions — scripts call them directly (see the
            ``PythonScript`` docs). Passing `None` or an empty list means no
            tools are bound.

            **Naming gotcha**: each tool is registered inside the sandbox
            under ``tool.name``, which is ``tool._func.__name__``. So
            ``Tool(_my_helper)`` registers as ``_my_helper`` (underscore
            preserved) and the script must call ``_my_helper(...)``.
            Name your tool functions exactly as you want them to appear
            inside the generated script — rename the function, don't rely
            on an alias.
        sandbox (Sandbox): Optional. A pre-built ``Sandbox`` instance to
            reuse across calls. When supplied, the module will not build
            its own sandbox at ``call()`` time and ``sandbox_type`` is
            derived from ``type(sandbox)``. Pass this when the caller
            owns the sandbox lifecycle and state (variables, imports,
            function defs) must persist across successive calls — useful
            at training time when candidate scripts share cached state.
            When omitted, a fresh sandbox of ``sandbox_type`` is built
            per call.
        sandbox_type (type): Optional. The ``Sandbox`` subclass used to
            build a fresh sandbox per call when no ``sandbox`` is
            injected. Defaults to ``MirageSandbox``, or to
            ``type(sandbox)`` when ``sandbox`` is given. Any ``Sandbox``
            subclass whose ``__init__`` accepts ``(timeout=..., name=...)``
            works; register custom subclasses with
            ``@register_synalinks_serializable`` so they round-trip
            through ``get_config`` / ``from_config``.
        name (str): Optional. The name of the module.
        description (str): Optional. The description of the module.
        trainable (bool): Whether the module's variables should be trainable.

    ``call`` also accepts an optional ``sandbox`` kwarg. The resolution
    order is: per-call kwarg > constructor-supplied ``sandbox`` > a
    fresh sandbox of ``sandbox_type``. The first two cases let the
    caller keep sandbox state alive across calls; the third is the
    stateless-per-call default.
    """

    def __init__(
        self,
        *,
        schema=None,
        data_model=None,
        python_script=None,
        seed_scripts=None,
        default_return_value=None,
        return_python_script=False,
        timeout=5,
        tools=None,
        sandbox=None,
        sandbox_type=None,
        name=None,
        description=None,
        trainable=True,
    ):
        super().__init__(
            name=name,
            description=description,
            trainable=trainable,
        )
        if not schema and data_model:
            schema = data_model.get_schema()
        self.schema = schema

        if not python_script:
            raise ValueError("You should provide the `python_script` argument")
        self.python_script = python_script

        if not default_return_value:
            raise ValueError("You should provide the `default_return_value` argument")

        try:
            jsonschema.validate(default_return_value, self.schema)
        except ValidationError as e:
            raise ValueError(
                f"`default_return_value` parameter does not conform to schema: {e}"
            )

        self.default_return_value = default_return_value
        self.return_python_script = return_python_script
        self.timeout = timeout

        self.tools = {}
        if tools:
            for tool in tools:
                self.tools[tool.name] = tool

        # Sandbox handling mirrors RecursiveLanguageModelAgent: if a
        # concrete sandbox is supplied at construction, reuse it across
        # calls and derive `sandbox_type` from its class. Otherwise fall
        # back to `sandbox_type` (default MirageSandbox) and build one
        # fresh per `call()`.
        self.sandbox = sandbox
        if sandbox is not None:
            self.sandbox_type = type(sandbox)
        else:
            self.sandbox_type = sandbox_type or MirageSandbox

        if not seed_scripts:
            seed_scripts = []
        self.seed_scripts = seed_scripts

        seed_candidates = [
            {"python_script": seed_script} for seed_script in self.seed_scripts
        ]

        self.state = self.add_variable(
            initializer=PythonScript(
                python_script=self.python_script,
                seed_candidates=seed_candidates,
            ).get_json(),
            data_model=PythonScript,
            name="state_" + self.name,
        )

    async def execute(self, inputs, python_script, sandbox=None):
        """Execute the Python script in the sandbox with a timeout."""
        return await _run_script(
            python_script,
            inputs.get_json(),
            self.schema,
            self.timeout,
            self.tools,
            sandbox=sandbox,
            sandbox_type=self.sandbox_type,
        )

    async def call(self, inputs, training=False, sandbox=None):
        if not inputs:
            return None
        python_script = self.state.get("python_script")
        # Sandbox resolution order: per-call kwarg > constructor-supplied
        # sandbox > fresh sandbox of `sandbox_type` (built inside
        # `_run_script` when `sandbox` is still None).
        if sandbox is None:
            sandbox = self.sandbox
        result, stdout, stderr = await self.execute(
            inputs, python_script, sandbox=sandbox
        )
        if training:
            predictions = self.state.get("current_predictions")
            if result:
                if self.return_python_script:
                    predictions.append(
                        {
                            "inputs": {
                                **inputs.get_json(),
                            },
                            "outputs": {
                                "python_script": python_script,
                                **result,
                                "stdout": stdout,
                                "stderr": stderr,
                            },
                            "reward": None,
                        }
                    )
                else:
                    predictions.append(
                        {
                            "inputs": {
                                **inputs.get_json(),
                            },
                            "outputs": {
                                **result,
                                "stdout": stdout,
                                "stderr": stderr,
                            },
                            "reward": None,
                        }
                    )
            else:
                if self.return_python_script:
                    predictions.append(
                        {
                            "inputs": {
                                **inputs.get_json(),
                            },
                            "outputs": {
                                "python_script": python_script,
                                "stdout": stdout,
                                "stderr": stderr,
                            },
                            "reward": None,
                        }
                    )
                else:
                    predictions.append(
                        {
                            "inputs": {
                                **inputs.get_json(),
                            },
                            "outputs": {
                                "stdout": stdout,
                                "stderr": stderr,
                            },
                            "reward": None,
                        }
                    )
        if result:
            if self.return_python_script:
                return JsonDataModel(
                    json={
                        "python_script": python_script,
                        **result,
                        "stdout": stdout,
                        "stderr": stderr,
                    },
                    schema=self.schema,
                    name=self.name,
                )
            else:
                return JsonDataModel(
                    json={
                        **result,
                        "stdout": stdout,
                        "stderr": stderr,
                    },
                    schema=self.schema,
                    name=self.name,
                )
        else:
            if self.return_python_script:
                return JsonDataModel(
                    json={
                        "python_script": python_script,
                        **self.default_return_value,
                        "stdout": stdout,
                        "stderr": stderr,
                    },
                    schema=self.schema,
                    name=self.name,
                )
            else:
                return JsonDataModel(
                    json={
                        **self.default_return_value,
                        "stdout": stdout,
                        "stderr": stderr,
                    },
                    schema=self.schema,
                    name=self.name,
                )

    async def compute_output_spec(self, inputs, training=False, sandbox=None):
        if self.return_python_script:
            return await ops.concat(
                await ops.out_mask(
                    PythonScript.to_symbolic_data_model(),
                    mask=list(Trainable.keys()),
                    name="python_script_masked_" + self.name,
                ),
                await ops.concat(
                    SymbolicDataModel(schema=self.schema),
                    PythonConsoleLog,
                    name="python_logs_" + self.name,
                ),
                name=self.name,
            )
        else:
            return await ops.concat(
                SymbolicDataModel(schema=self.schema),
                PythonConsoleLog,
                name=self.name,
            )

    def get_config(self):
        config = {
            "schema": self.schema,
            "python_script": self.python_script,
            "seed_scripts": self.seed_scripts,
            "default_return_value": self.default_return_value,
            "return_python_script": self.return_python_script,
            "timeout": self.timeout,
            "sandbox_type": get_registered_name(self.sandbox_type),
            "name": self.name,
            "description": self.description,
            "trainable": self.trainable,
        }
        sandbox_config = {
            "sandbox": (
                serialization_lib.serialize_synalinks_object(self.sandbox)
                if self.sandbox is not None
                else None
            )
        }
        tools_config = {
            "tools": [
                serialization_lib.serialize_synalinks_object(tool)
                for tool in self.tools.values()
            ]
        }
        return {**config, **sandbox_config, **tools_config}

    @classmethod
    def from_config(cls, config):
        tools = [
            serialization_lib.deserialize_synalinks_object(tool)
            for tool in config.pop("tools", [])
        ]
        sandbox = None
        if "sandbox" in config:
            sandbox_serialized = config.pop("sandbox")
            if sandbox_serialized is not None:
                sandbox = serialization_lib.deserialize_synalinks_object(
                    sandbox_serialized
                )
        sandbox_type_name = config.pop("sandbox_type", None)
        sandbox_type = (
            get_registered_object(sandbox_type_name) if sandbox_type_name else None
        )
        return cls(
            tools=tools or None,
            sandbox=sandbox,
            sandbox_type=sandbox_type,
            **config,
        )

execute(inputs, python_script, sandbox=None) async

Execute the Python script in the sandbox with a timeout.

Source code in synalinks/src/modules/synthesis/python_synthesis.py
async def execute(self, inputs, python_script, sandbox=None):
    """Execute the Python script in the sandbox with a timeout."""
    return await _run_script(
        python_script,
        inputs.get_json(),
        self.schema,
        self.timeout,
        self.tools,
        sandbox=sandbox,
        sandbox_type=self.sandbox_type,
    )